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example.fasta
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72 lines (72 loc) · 4.03 KB
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>Phatr3_J20657.t1 peptide: Phatr3_J20657.p1 pep:protein_coding
MLGRCPTDCGPQNPPLLRKTTMRSFCIAALLAVASAFTTQPTSFTVKTANVGERASGVFP
EQSSAHRTRKATIVMDGKANAIRDRITSVKNTRKITMAMKLVAAAKVRRAQDAVLATRPF
SETLQSVFGGLIQRLGGESVDLPLLTEREVKKVTLLVITGDRGLCGGYNSFMIKKAEARF
NELKKNGVEADLILVGKKGIAYFERRGFPIRKKYETGQNPTAKQALAIAEEVSSTFLSGE
SDAVELLYTKFVSLIASSPSIRTLVPFSASDITAKGDEVFQLTSESGQFGVERTELDVAA
PQEFPNDMIFEQDPIQIVNAILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGSLA
KQLNLEYNRARQAAVTQELLEIVSGASALE
>Phatr3_J2793.t1 peptide: Phatr3_J2793.p1 pep:protein_coding
MGRGVIIFCVKNFAVWLLIITSAVSIQAWIPLPLSATVKARIDSTTLFFSRYKTPLYHGG
NEESYGPPAPAVDSRYYTYVEAPVQSSRSRDTKQPITLSRFLSDAVKENAELRDLESLFM
GIQMACKTIASLVNRAGLVYSITEDIRDDITDGRFYSMKRLDHLSTVVLKNALKYTGKCE
VLAPKSRLDNESPAQHQPGVLIAKSMDSNYVACLDPLDGSGNADASICTGTVFGVFEKET
STGISLWKKSREDRDRELVDSVLQPGKNMRAAGYCLYSSATVLVFTLGESVQGFTLDPQM
QEFVLTHPDLTIPKRGSVYSCNEANSEGWDDAYNSYLRNLKTGKGETGKRYAHRYVGSMV
GDIHRTLLYGGIFAYPADRLEHPDGNLQLLYKAAPMAYIVHTAGGKAIDGRSGSLLEVRP
DRVHQKSPCFIGSYDDVSEWESYLSDNEGIYYKKGRD
>Phatr3_EG02276.t1 peptide: Phatr3_EG02276.p1 pep:protein_coding
MGRTMLVGWGALLSVSVNLHGVHARPVVRNIRSTHEFDRLLEKHASETGLPVVVDFYSDS
CGPCRMMAPIFRNVAAEFADRAVFVKVDTNAQPELSQRYQVRSLPTFQFFVDGKKAHQAV
GGIGEQGLRQEANQIVRQAQLENVLLTLDALLEYYHTVDPEKPRSDVETVYQKCAKMNRK
VEGCVGSSANALARKLKKKYQAAPQLVPRILPTDAPTSTPKPSRATPPVAASSNTGTPTT
HTLESASLADLQSELERRLDQARDEQVEHEDPAEDEADPDFRPWPGSSHSAYPEAVLVIG
GGPAGLAAALYAARAGLAPLVLAPSLGGQLQGKGVDVENYPGLPLVTGPAVVAAMRKQAA
HFGAFFEDDVVFRVDASQRPLQIHTNATGIIAAHSIIVATGAESNWLGIPGEWEMRGGGV
SSCATCDGFLYAQRDVVVVGGGDAAMEDALVLARTSRSVTVVHRRDKFRASKVLSDRVQN
HPAITVRWNATVQEILGQAVVDANDEDDNSNDHDVDLDSIPKQVTGVVLVDTVTGEETKL
SCHAVFVAIGHTPATAFLHGVVDFDPEHDGYLWTQPHSTQTSVPGIFAAGDVADSVYRQA
ITSAGSGAAAALDAERYLSEHGLGMEEELLEAELLAELVNDGGMSARESYNAYEDAGGRM
QGMKESVAAEL
>Phatr3_EG02643.t1 peptide: Phatr3_EG02643.p1 pep:protein_coding
MIFMRIAVAALALLAAPSIRAEEAGEEAKMGTVIGIDLGTTYSCVGVFKNGRVEIIANDQ
GNRITPSYVAFMPSGERLVGDAAKNQATINPENTVFDVKRLIGRKYSDKSVQADKKLVPY
EIISDKDKPMIEVIQNEKTFKFAPEEVSAMVLQKMKLTAETFLGKEIKHAVVTVPAYFND
AQRQATKDAGTIAGLKVERIINEPTAAAIAYGMDKTGGESNVLVFDLGGGTFDVTLLTID
NGVFEVLATNGDTHLGGEDFDQRVMQYFIKMMKKKSDVDISKDKRALQKLRKEVERVKRA
LSSQQQARLEIEDLAEGFDLSETLTRARFEELNNDLFKKTMGPVARVMEDADLSKSEIDE
IVLVGGSTRIPKVQQLISEYFGGKEPSKGINPDEAVAYGAAVQGGILSGEGGDATSEILL
LDVTPLSQGIETVGGVMTKLINRGTTIPTKKSQTFSTHQDNQNVVLIQVYEGERSMTKDN
HNLGKFELTGIPPAPRGVPQIEVTFEVDANGILQVSAEDKGTGKAEKITITAEKGRLSEE
EIERMVREAEEFAEEDKKVKERIDARNGLESYLYNLKNTLDDDEKGLADNLSAEDKKELQ
DMIDETLDWMDGNPEADKEDYDEKLKEVEQVANPIMRNVYSGGAGGGAEDDADFADDEL
>Phatr3_J8982.t1 peptide: Phatr3_J8982.p1 pep:protein_coding
MASITLNRSRFTMITAIGMSHPRSHGTPRSVLLLLLRQFSSKDWNGKGTDSASRSGPVLI
KKTPRSAAAAKLRSTAPSLNGSTTDSTTGAVKHHPAHHYINGGTPCDPAPPPYNLAEYGE
ESLYTLVLLRHGESEWNKLNQYTGWCDVNLTSTGEMEARTAGRLLYENGIELDHAFTSVL
RRASFSCNMMLNMANQHWVPVTKTWRLNERHYGALQGYNKDTAYKELGLDQELVMQMRRS
YDVRPPRMLDDHPYWHGTDRRYRKLSPDQLDSSRAESLKDAAERIMPFYNSVVVPSMRSG
NKCIIVSHANTIRTLIKNIDGISDEDIKGMSIPTGIPLLYRLDKNMKPVDPQIELEFRYM
VEPKGYTWGTSREHGFHGVYLGDLERLQEIQRRRDATNRDWQRIILRNIGRALGWNDLES
STSLGAKTEPNAYGTSNPKVVETRQLWWQIHTKMQTSEYSNMLLLVKMEDALEELMYQRK
QKYITQAAYAKMIDQIHLDTEGSVVEPFCELAERHDREERQRIWYESLTLDLEEECLIK
>Phatr3_J45997.t1 peptide: Phatr3_J45997.p1 pep:protein_coding
MLSSTSTIPKLDGEVVTLSVIKKPTETKKRRTKIICTLGPACWSEEGLGQLMDAGMNVAR
FNFSHGDHEGHGKVLERLRKVAKEKKRNIAVLLDTKGPEIRTGFFADGIDKINLSKGDTI
VLTTDYDFKGDSKRLACSYPTLAKSVTQGQAILIADGSLVLTVLSIDTANNEVQCRVENN
ASIGERKNMNLPGVVVDLPTFTERDVNDIVNFGIKSKVDFIAASFVRKGSDVTNLRKLLA
DNGGPQIKIICKIENQEGLENYGDILEHTDAIMVARGDLGMEIPSSKVFLAQKYMIREAN
VAGKPVVTATQMLESMVTNPRPTRAECSDVANAVYDGTDAVMLSGETANGPHFEKAVLVM
ARTCCEAESSRNYNLLFQSVRNSIVIARGGLSTGESMASSAVKSALDIEAKLIVVMSETG
KMGNYVAKFRPGLSVLCMTPNETAARQASGLLLGMHTVVVDSLEKSEELVEELNYELVQS
NFLKPGDKMVVIAGRMAGMKEQLRIVTLDEGKSYGHIVSGTSFFFERTRLLDFND
>Seq_too_short_with_signal_peptide
MHASSIGNALLLLLLLLPEPTIDEANDASAFAPENDSDIRECTLY
>Seq_too_short
MENDSDIRECTLY
>Seq_in_scored_region_forbidden_aa_code
MHASSIGNALLLLLLLLPEPTIDEANDASAXFAP-THISISNTAREALPRTEINTHISIS
NTAREALPRTEINTHISISNTAREALPRTEINTHISISNTAREALPRTEINENDSHERE*
>Seq_outside_scored_region_forbidden_aa_code
MHASSIGNALLLLLLLLPEPTIDEANDASAFAPTHISISNTAREALPRTEINTHISISNT
AREALPRTEINXTHISISNTAREALPRTEIN-THISISNTAREALPRTEINENDSHERE*