For exome samples there won't be any calls on the mitochondria with the current setup. Thus no ranked vcfs will be generated for and these files should be set as on-mandatory.
|
frozenset(["rank_and_filter", "mt_clinical"]): { |
The raw calls are already non-mandatory
For exome samples there won't be any calls on the mitochondria with the current setup. Thus no ranked vcfs will be generated for and these files should be set as on-mandatory.
hermes/cg_hermes/config/raredisease.py
Line 254 in 01be334
The raw calls are already non-mandatory