corecut/setup.py at main · DessimozLab/corecut · GitHub

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from setuptools import setup, find_packages

with open("README.md", "r", encoding="utf-8") as fh:
    long_description = fh.read()

setup(
    name="corecut",
    version="0.1.0",
    author="CoreCut Team",
    author_email="dmoi@unil.ch",
    description="Extract structural cores from protein families using "
                "Foldseek",
    long_description=long_description,
    long_description_content_type="text/markdown",
    url="https://github.com/DessimozLab/corecut",
    packages=find_packages(),
    classifiers=[
        "Development Status :: 3 - Alpha",
        "Intended Audience :: Science/Research",
        "License :: OSI Approved :: MIT License",
        "Operating System :: OS Independent",
        "Programming Language :: Python :: 3",
        "Programming Language :: Python :: 3.8",
        "Programming Language :: Python :: 3.9",
        "Programming Language :: Python :: 3.10",
        "Programming Language :: Python :: 3.11",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
    ],
    python_requires=">=3.8",
    install_requires=[
        "pandas>=1.3.0",
        "numpy>=1.20.0",
        "biopython>=1.79",
        "tqdm>=4.60.0",
    ],
    extras_require={
        "dev": [
            "pytest>=6.0",
            "pytest-cov",
            "black",
            "flake8",
            "mypy",
        ],
    },
    entry_points={
        "console_scripts": [
            "corecut=corecut.cli:main",
        ],
    },
    include_package_data=True,
    zip_safe=False,
)