[orthoxml-tools](https://github.com/DessimozLab/orthoxml-tools/tree/main)/pyproject.toml ``` dependencies = [ "lxml>=5.3.0", "dendropy>=5.0.8", ``` [FastOMA](https://github.com/DessimozLab/FastOMA/tree/main)/pyproject.toml ``` dependencies = [ "biopython ~=1.81", "DendroPy >=4.5,<=4.6.1", ```