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How to install KlugerLab / FIt-SNE for Seurat usage in Windows 10 system #96

@grimwoo

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@grimwoo

How to install KlugerLab / FIt-SNE for Seurat usage in Windows 10 system ?

I recently want to use this tSNE method to classify my seurat object. And I find many issues about this problem. However, I failed to install the .zip files in R or directly use the .exe file.

The error information in seurat is :

> object <- RunTSNE(object = object, tsne.method = 'FIt-SNE')
Warning: The following arguments are not used: pca
Error: Could not find the following programs: FItSNE.exe
``

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