SPIDER/environment.yml at main · RunningMSN/SPIDER · GitHub

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name: spider
channels:
  - bioconda
  - conda-forge
  - defaults
dependencies:
  - biopython=1.85=py313h90d716c_1
  - blast=2.16.0=hb260f6e_5
  - bzip2=1.0.8=h99b78c6_7
  - c-ares=1.34.5=h5505292_0
  - ca-certificates=2025.6.15=hbd8a1cb_0
  - curl=8.14.1=h73640d1_0
  - entrez-direct=22.4=hd5f1084_0
  - importlib-metadata=8.7.0=pyhe01879c_1
  - krb5=1.21.3=h237132a_0
  - libasprintf=0.24.1=h493aca8_0
  - libblas=3.9.0=32_h10e41b3_openblas
  - libcblas=3.9.0=32_hb3479ef_openblas
  - libcurl=8.14.1=h73640d1_0
  - libcxx=20.1.7=ha82da77_0
  - libedit=3.1.20250104=pl5321hafb1f1b_0
  - libev=4.33=h93a5062_2
  - libexpat=2.7.0=h286801f_0
  - libffi=3.4.6=h1da3d7d_1
  - libgettextpo=0.24.1=h493aca8_0
  - libgfortran=5.0.0=14_2_0_h6c33f7e_103
  - libgfortran5=14.2.0=h6c33f7e_103
  - libiconv=1.18=hfe07756_1
  - libidn2=2.3.8=h38aa460_0
  - libintl=0.24.1=h493aca8_0
  - liblapack=3.9.0=32_hc9a63f6_openblas
  - liblzma=5.8.1=h39f12f2_2
  - libmpdec=4.0.0=h5505292_0
  - libnghttp2=1.64.0=h6d7220d_0
  - libopenblas=0.3.30=openmp_hf332438_0
  - libsqlite=3.50.2=h6fb428d_0
  - libssh2=1.11.1=h1590b86_0
  - libunistring=0.9.10=h3422bc3_0
  - libzlib=1.3.1=h8359307_2
  - llvm-openmp=20.1.7=hdb05f8b_0
  - ncbi-vdb=3.2.1=h4675bf2_0
  - ncurses=6.5=h5e97a16_3
  - numpy=2.3.1=py313h41a2e72_0
  - openssl=3.5.1=h81ee809_0
  - packaging=25.0=pyh29332c3_1
  - pandas=2.3.0=py313h668b085_0
  - perl=5.32.1=7_h4614cfb_perl5
  - perl-archive-tar=3.04=pl5321hdfd78af_0
  - perl-carp=1.38=pl5321hdfd78af_4
  - perl-common-sense=3.75=pl5321hdfd78af_0
  - perl-compress-raw-bzip2=2.201=pl5321h9337747_1
  - perl-compress-raw-zlib=2.202=pl5321hb76e6fb_0
  - perl-encode=3.21=pl5321h5505292_1
  - perl-exporter=5.72=pl5321hdfd78af_2
  - perl-exporter-tiny=1.002002=pl5321hdfd78af_0
  - perl-extutils-makemaker=7.70=pl5321hd8ed1ab_0
  - perl-io-compress=2.201=pl5321haef7865_5
  - perl-io-zlib=1.15=pl5321hdfd78af_0
  - perl-json=4.10=pl5321hdfd78af_1
  - perl-json-xs=4.03=pl5321h4675bf2_4
  - perl-list-moreutils=0.430=pl5321hdfd78af_0
  - perl-list-moreutils-xs=0.430=pl5321hbdacb55_5
  - perl-parent=0.236=pl5321hdfd78af_2
  - perl-pathtools=3.75=pl5321hc71e825_2
  - perl-scalar-list-utils=1.69=pl5321hc71e825_0
  - perl-storable=3.15=pl5321hc71e825_2
  - perl-types-serialiser=1.01=pl5321hdfd78af_0
  - pip=25.1.1=pyh145f28c_0
  - pyfaidx=0.8.1.4=pyhdfd78af_0
  - python=3.13.5=hf3f3da0_102_cp313
  - python-dateutil=2.9.0.post0=pyhe01879c_2
  - python-tzdata=2025.2=pyhd8ed1ab_0
  - python_abi=3.13=7_cp313
  - pytz=2025.2=pyhd8ed1ab_0
  - pyvcf3=1.0.3=pyhdfd78af_0
  - readline=8.2=h1d1bf99_2
  - rpsbproc=0.5.0=hf8bb5b5_3
  - setuptools=80.9.0=pyhff2d567_0
  - six=1.17.0=pyhd8ed1ab_0
  - tk=8.6.13=h892fb3f_2
  - tzdata=2025b=h78e105d_0
  - wget=1.21.4=he2df1f1_0
  - zipp=3.23.0=pyhd8ed1ab_0
  - zlib=1.3.1=h8359307_2
  - zstd=1.5.7=h6491c7d_2
prefix: /opt/homebrew/Caskroom/miniconda/base/envs/spider