tests

Merge pull request #217 from SCAI-BIO/dependabot/uv/all-dependencies-… #507

	name: tests

	on:
	push:
	branches: ["main"]
	pull_request:
	branches: ["main"]

	jobs:
	build:
	permissions:
	contents: read
	pull-requests: write

	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	python-version: ["3.10", "3.11", "3.12", "3.13", "3.14"]

	services:
	postgres:
	image: ankane/pgvector # pgvector-enabled PostgreSQL
	ports:
	- 5432:5432
	env:
	POSTGRES_USER: testuser
	POSTGRES_PASSWORD: testpass
	POSTGRES_DB: testdb
	options: >-
	--health-cmd="pg_isready -U testuser -d testdb"
	--health-interval=10s
	--health-timeout=5s
	--health-retries=5

	env:
	TEST_POSTGRES_URI: postgresql://testuser:testpass@localhost:5432/testdb

	steps:
	- uses: actions/checkout@v6

	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v6
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install the latest version of uv
	uses: astral-sh/setup-uv@v7
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install dependencies
	run: uv sync --locked --all-extras --dev

	- name: Wait for PostgreSQL to become ready
	run: \|
	until pg_isready -h localhost -U testuser -d testdb; do sleep 1; done

	- name: Test with pytest
	run: uv run pytest --junitxml=junit.xml -o junit_family=legacy --cov=datastew --cov-report=xml

	- name: Codecov
	uses: codecov/codecov-action@v5
	with:
	token: ${{ secrets.CODECOV_TOKEN }}

	- name: Upload test results to Codecov
	if: ${{ !cancelled() }}
	uses: codecov/test-results-action@v1
	with:
	token: ${{ secrets.CODECOV_TOKEN }}

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