Merge branch 'dev' into activate_tc

# Conflicts:
#	pyproject.toml
#	src/autointent/_dump_tools/unit_dumpers.py
#	src/autointent/_wrappers/embedder/sentence_transformers.py
#	src/autointent/modules/scoring/_gcn/gcn_model.py
#	tests/context/test_vector_index.py
#	tests/embedder/test_caching.py
#	tests/embedder/test_memory.py

Author: Samoed

.github/workflows/reusable-test.yaml

@@ -15,7 +15,7 @@ jobs:
       fail-fast: false
       matrix:
         os: [ ubuntu-latest ]
-        python-version: [ "3.10", "3.11", "3.12" ]
+        python-version: [ "3.10", "3.11", "3.12", "3.13", ]
         include:
           - os: windows-latest
             python-version: "3.10"

pyproject.toml

@@ -29,7 +29,7 @@ classifiers=[
     'Framework :: Sphinx',
     'Typing :: Typed',
 ]
-requires-python = ">=3.10,<3.15"
+requires-python = ">=3.10,<3.14"
 dependencies = [
     "sentence-transformers (>=3,<6)",
     "scikit-learn (>=1.5,<2.0)",

src/autointent/_wrappers/embedder/sentence_transformers.py

@@ -1,5 +1,6 @@
 from __future__ import annotations
 
+import json
 import json
 import logging
 import tempfile

src/autointent/modules/scoring/_gcn/gcn_model.py

@@ -2,6 +2,7 @@
 
 import json
 from typing import TYPE_CHECKING
+from pathlib import Path
 
 import torch
 from pydantic import BaseModel

tests/context/test_vector_index.py

@@ -1,5 +1,6 @@
 from __future__ import annotations
 
+import sys
 import sys
 import tempfile
 import uuid

tests/embedder/test_memory.py

@@ -2,6 +2,7 @@
 
 from typing import TYPE_CHECKING
 
+import numpy as np
 import numpy as np
 import pytest