the download script should generate an error if the sample is not found in the sequence index file
code/download_sample.pl BLAH data/1000Genomes_HiSeq.txt
When run from within the batch_bowtie2.sh script, the script continues onto the next step. An error would halt the script before running bowtie2
the download script should generate an error if the sample is not found in the sequence index file
When run from within the batch_bowtie2.sh script, the script continues onto the next step. An error would halt the script before running bowtie2