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pandas append function has been deprecated #5

@opain

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@opain

Hi,

The append function has been deprecated in more recent versions of pandas, leading to an error when running gcsc.

It might be worth adding a conda environment or list of required packages to run gcsc.

For example, this conda .yaml seems to works fine:

name: gcsc
channels:

  • bioconda
  • conda-forge
  • defaults
    dependencies:
  • python=3.8
  • pandas=1.4.0
  • scipy
  • numpy

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