Check for cycles in basic.owl using souffle.#2125
Closed
Conversation
Member
Author
|
The output still needs to be added to the checks targets; nothing runs it right now. |
cmungall
reviewed
Oct 22, 2021
cmungall
reviewed
Oct 22, 2021
| basic(restr, OWL_ON_PROPERTY, p), | ||
| basic(restr, OWL_SOME_VALUES_FROM, o), | ||
| basic(restr, RDF_TYPE, OWL_RESTRICTION), | ||
| match("<.+>", o). |
cmungall
reviewed
Oct 22, 2021
Member
Author
|
I updated the output so that the paths are provided. |
Closed
4 tasks
Contributor
|
This PR has not seen any activity in the past month; if nobody comments or reviews it in the next week, the PR editor will be allowed to proceed with merging without explicit approval, should they wish to do so. |
Contributor
|
Needs to be reopened - redone to work - souffle did not stick. |
Member
Author
|
@matentzn I have been using a similar script for go-basic for quite a while now. So if you still want it, it works. |
Contributor
|
Yes! Can you open a PR on Uberon with that? That would be great! |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
4 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Fixes #1829.
Creates
tmp/basic-cycles.tsv.This check is simple, but doesn't explain the path causing the cycle.