openpkflow/mkdocs.yml at main · priyamthakar/openpkflow · GitHub

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site_name: OpenPKFlow
site_description: Python-first toolkit for dissolution, NCA, PK/PD simulation, and pharmacometric reporting.
site_author: Priyam Thakar
site_url: https://priyamthakar.github.io/openpkflow/
repo_url: https://github.com/priyamthakar/openpkflow
repo_name: priyamthakar/openpkflow
edit_uri: edit/main/docs/

theme:
  name: material
  palette:
    - media: "(prefers-color-scheme: light)"
      scheme: default
      primary: indigo
      accent: indigo
      toggle:
        icon: material/brightness-7
        name: Switch to dark mode
    - media: "(prefers-color-scheme: dark)"
      scheme: slate
      primary: indigo
      accent: indigo
      toggle:
        icon: material/brightness-4
        name: Switch to light mode
  features:
    - navigation.instant
    - navigation.tabs
    - navigation.sections
    - navigation.top
    - search.suggest
    - search.highlight
    - content.code.copy
  logo: logo.png
  favicon: logo.png

nav:
  - Home: index.md
  - Positioning: positioning.md
  - Tutorials:
    - Dissolution Similarity: tutorials/dissolution.md
    - Advanced Dissolution Workbench: tutorials/dissolution-workbench.md
    - NCA: tutorials/nca.md
    - Sparse oral PK fitting: tutorials/sparse-nca.md
    - Formulation-to-report pipeline: tutorials/pipeline.md
    - PK Simulation: tutorials/sim.md
    - Population PK: tutorials/pop.md
    - Bioequivalence: tutorials/be.md
    - Formal BE Decision: decisions/formal-be.md
    - Bayesian PK: tutorials/bayes.md
    - IVIVC Level A: tutorials/ivivc.md
  - Theory Guide: theory.md
  - Validation Matrix: validation-matrix.md
  - Reference:
    - dissolution: reference/dissolution.md
    - nca: reference/nca.md
    - sim: reference/sim.md
    - pipeline: reference/pipeline.md
    - pop: reference/pop.md
    - be: reference/be.md
    - bayes: reference/bayes.md
    - ivivc: reference/ivivc.md
    - ml: reference/ml.md
    - validation: reference/validation.md
  - Changelog: changelog.md
  - Migration Guide: migration-cheatsheet.md

markdown_extensions:
  - pymdownx.highlight:
      anchor_linenums: true
  - pymdownx.superfences
  - pymdownx.tabbed:
      alternate_style: true
  - admonition
  - pymdownx.details
  - tables
  - toc:
      permalink: true

extra:
  social:
    - icon: fontawesome/brands/github
      link: https://github.com/priyamthakar/openpkflow
    - icon: fontawesome/brands/python
      link: https://pypi.org/project/openpkflow/