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@Genentech

Genentech

Dedicated to pursuing groundbreaking science to discover and develop medicines

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  1. BRAID BRAID Public

    BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.

    224 10

  2. scimilarity scimilarity Public

    A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

    Python 244 26

  3. gReLU gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Python 320 52

  4. SpatialAgent SpatialAgent Public

    An AI agent for spatial biology

    Python 161 21

  5. equifold equifold Public

    Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

    Python 129 19

  6. gneprop gneprop Public

    GNEprop is a graph neural network-based model to predict antibacterial activity from molecular structures in virtual screening settings.

    Jupyter Notebook 43 5

Repositories

Showing 10 of 136 repositories
  • scallops Public

    SCALLOPS (Scalable Library for Optical Pooled Screens) is a comprehensive Python package designed to streamline and scale the analysis of Optical Pooled Screens (OPS) for biological data.

    Genentech/scallops’s past year of commit activity
    Python 2 0 0 3 Updated Apr 10, 2026
  • jmpost Public
    Genentech/jmpost’s past year of commit activity
    R 17 4 55 (1 issue needs help) 2 Updated Apr 10, 2026
  • checked Public

    batch R CMD check management

    Genentech/checked’s past year of commit activity
    R 8 1 15 0 Updated Apr 10, 2026
  • gneprop Public

    GNEprop is a graph neural network-based model to predict antibacterial activity from molecular structures in virtual screening settings.

    Genentech/gneprop’s past year of commit activity
    Jupyter Notebook 43 5 1 0 Updated Apr 8, 2026
  • compbiobench-runner Public

    CompBioBench: A benchmark of 100 diverse, verifiable questions for agents for computational biology (scripts for running agents)

    Genentech/compbiobench-runner’s past year of commit activity
    Python 22 MIT 5 0 0 Updated Apr 6, 2026
  • SpatialAgent Public

    An AI agent for spatial biology

    Genentech/SpatialAgent’s past year of commit activity
    Python 161 MIT 21 1 0 Updated Apr 4, 2026
  • SpatialQPFs Public
    Genentech/SpatialQPFs’s past year of commit activity
    R 5 0 0 0 Updated Apr 1, 2026
  • gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Genentech/gReLU’s past year of commit activity
    Python 320 MIT 52 22 4 Updated Mar 26, 2026
  • Move37 Public

    Move37 is a data-driven scheduling and resource management system for maximising throughput for individuals and teams

    Genentech/Move37’s past year of commit activity
    Python 2 5 19 4 Updated Mar 24, 2026
  • decima Public

    Decima is a Python library to train sequence models on single-cell RNA-seq data.

    Genentech/decima’s past year of commit activity
    Python 65 8 1 0 Updated Mar 20, 2026
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