v3.5.5

🔧 Maintenance

• Updated nightly.yml to use pythons v11-13 #maint
• Disabled Numba for python 3.13 to improve speed. This can be re-enabled once numba supports 3.13. #maint
• Fixed the versioning when merging into release #maint

v3.5.4

🔧 Maintenance

• set_mpl_style no longer sets display to retina, as the maintainers of that package keep changing how to process works, and now seems to only be available as a 'magic' command in Jupyter Notebooks. #maint

🐛 Bugfixes

• Fix handling of trapped pores and throats in invasion sequence #bug

v3.5.3

🔧 Maintenance

• Improve build and install process by removing setup.py #maint

v3.5.2

🔧 Maintenance

• Install pypardiso by default on x86_64 platforms when testing and building docs #docs #maint
• Add uv.lock to .gitignore #maint

🐛 Bugfixes

• Correctly identify uninvaded throats between previously invaded pores within same cluster #bug
• Fix trapped volume detection #bug

📗 Documentation

• Update example 8 #docs
• Fixed mistake in pore network size consistency example 6 #docs
• nstall pypardiso by default on x86_64 platforms when testing and building docs #docs #maint

v3.5.1

🔧 Maintenance

• Moving to uv for installs (ie added pyproject.toml and uv.lock)
• Fixing deprecations in dependencies (ie chemicals and numpy)

v3.5.0

🍰 Enhancements

• Adjusted surface area model to accept lower limit (amin), defaults to 0

🔧 Maintenance

• Fixed deprecation error coming from new Scipy and Numpy versions

v3.4.1

🐛 Bugfixes

• More robust conduit length models
• Fixing spacing in BCC network
• Updated pore surface area calculation models

📗 Documentation

• Update docs with example on network extraction

v3.4.0

• 🐛 Bugfixes

• Added try/except to __getitem__ in Phase in case some settings are missing
• Fixed dtype bug in isoutside function, and passing f to reflect_basepoints
• Fixed use of matplotlib's docstring substitution helper function to be version resistant

v3.3.0

🍰 Enhancements

• Accelerated tessellation generators
• Enhanced reflect_base_points to accept a scale-factor to control number of points
• Performing Delaunay triangulation in delaunay_voronoi_dual is now optional
• Enhanced create_incidence_matrix to allow 2*Nt long weights

🔧 Maintenance

• Removed pypardiso as a hard dependency to suppport ARM64 architecture
• Updated use of matplotlib's docstring module for their new deprecation

🐛 Bugfixes

• Fixed bug in merge_pores which used too many neighbors when finding centroid
• Fixed bug in pore surface area models due to incorrect use of flatten on conns

v3.2.1

🚀 New features

• Added transient thermal conduction class

🍰 Enhancements

• Added label_by option to plot_connections and plot_coordinates

🐛 Bugfixes

• Fixed memory leak
• Fixed a bug in Transport.rate, which broke when only two throats were present