Releases: SCAI-BIO/datastew
Releases · SCAI-BIO/datastew
Release list
v1.0.3
What's Changed
- feat: integrate Codecov for test coverage reporting in CI workflow by @tiadams in #203
- fix/add cov dependency by @tiadams in #204
- test(ols-client): add unittests by @mehmetcanay in #205
- test(visaulisation): extend tests by @mehmetcanay in #206
- chore(deps): bump pygments from 2.19.2 to 2.20.0 by @dependabot[bot] in #208
- feat: implement index on columns that are used for lookup by @mehmetcanay in #209
Full Changelog: v1.0.2...v1.0.3
v1.0.2
What's Changed
- fix(ols-client): resolve data loss, memory leaks, and state bugs in i… by @mehmetcanay in #202
Full Changelog: v1.0.1...v1.0.2
v1.0.1
What's Changed
- feat: add to_dict serialization to MappingResult by @mehmetcanay in #201
Full Changelog: v1.0.0...v1.0.1
v1.0.0
What's Changed
- ci: add python3.13 to tests by @mehmetcanay in #159
- chore: add Python 3.13 support and remove 3.14 compatibility by @mehmetcanay in #160
- chore(deps): bump the all-dependencies group across 1 directory with 5 updates by @dependabot[bot] in #162
- refactor: remove Optional from client attribute and streamline class logic by @mehmetcanay in #163
- refactor: add retries to weaviate connection by @mehmetcanay in #164
- Refactor/migrate poetry to uv by @mehmetcanay in #165
- chore(deps): bump the all-dependencies group with 2 updates by @dependabot[bot] in #166
- test(embedding): increase batch size to increase robustness by @mehmetcanay in #169
- chore(deps): bump the all-dependencies group with 4 updates by @dependabot[bot] in #167
- fix: load HuggingFace models once by @mehmetcanay in #171
- chore(deps): bump the all-dependencies group with 6 updates by @dependabot[bot] in #172
- chore(deps): bump the all-dependencies group with 3 updates by @dependabot[bot] in #173
- chore(deps): bump weaviate-client from 4.19.0 to 4.19.2 in the all-dependencies group by @dependabot[bot] in #174
- chore(deps): bump the all-dependencies group with 2 updates by @dependabot[bot] in #175
- chore(deps): bump filelock from 3.20.0 to 3.20.3 by @dependabot[bot] in #176
- chore(deps): bump the all-dependencies group across 1 directory with 7 updates by @dependabot[bot] in #179
- Chore/add support for python 3.14 by @mehmetcanay in #180
- ci: bump action versions by @mehmetcanay in #181
- Refactor/embedding cache optimization by @mehmetcanay in #182
- chore(deps): bump cachetools from 7.0.3 to 7.0.4 in the all-dependencies group by @dependabot[bot] in #183
- refactor: remove weaviate by @mehmetcanay in #189
- refactor: remove sqlite by @mehmetcanay in #190
- chore(deps): bump the all-dependencies group with 4 updates by @dependabot[bot] in #191
- Refactor/implement strict sql schema by @mehmetcanay in #192
- chore(deps): bump openai from 2.28.0 to 2.29.0 in the all-dependencies group by @dependabot[bot] in #194
- refactor: split process module into multiple modules by @mehmetcanay in #193
- Chore/extend documentation and clean code by @mehmetcanay in #195
- Test/extend tests by @mehmetcanay in #196
- Chore/migrate to psycopg3 by @mehmetcanay in #197
- feat: paginate search results by @mehmetcanay in #198
- Dev by @mehmetcanay in #199
- chore(deps): bump dependencies by @mehmetcanay in #200
Full Changelog: v0.6.1...v1.0.0
v0.6.1
What's Changed
- Update README.md by @tiadams in #142
- chore(deps): bump the all-dependencies group across 1 directory with 8 updates by @dependabot[bot] in #145
- chore(deps): bump the all-dependencies group across 1 directory with 12 updates by @dependabot[bot] in #149
- chore(deps): bump the all-dependencies group across 1 directory with 3 updates by @dependabot[bot] in #151
- chore(deps): bump all dependencies by @mehmetcanay in #153
- Docs/update readme and examples by @mehmetcanay in #154
- Fix/update OpenAI sdk syntax by @mehmetcanay in #156
- chore(deps): bump torch version by @mehmetcanay in #157
- ci: pin GitHub Actions release workflow to Python3.12 by @mehmetcanay in #158
Full Changelog: v0.6.0...v0.6.1
v0.6.0
What's Changed
- chore(deps): bump the all-dependencies group with 2 updates by @dependabot[bot] in #127
- chore(deps): bump the all-dependencies group with 2 updates by @dependabot[bot] in #128
- chore(deps): bump the all-dependencies group with 3 updates by @dependabot[bot] in #130
- Feat postgresql db by @mehmetcanay in #129
- chore(deps): bump the all-dependencies group with 3 updates by @dependabot[bot] in #132
- feat: JSONL import/export functionality for SQL adapters by @mehmetcanay in #133
- chore(deps): bump the all-dependencies group across 1 directory with 4 updates by @dependabot[bot] in #139
- chore(deps): bump scikit-learn from 1.7.0 to 1.7.1 in the all-dependencies group by @dependabot[bot] in #140
- chore: remove legacy functions and modules by @mehmetcanay in #136
Full Changelog: v0.5.8...v0.6.0
v0.5.8
What's Changed
- test: test for identical query by @mehmetcanay in #120
- chore(deps): bump the all-dependencies group across 1 directory with 3 updates by @dependabot in #122
- chore: add codeql actions script by @tiadams in #115
- chore(deps): bump the all-dependencies group across 1 directory with 5 updates by @dependabot in #124
- fix: objects escaping duplicate check by @mehmetcanay in #125
Full Changelog: v0.5.7...v0.5.8
v0.5.7
What's Changed
- chore(deps): bump the all-dependencies group with 3 updates by @dependabot in #113
- Update README.md by @tiadams in #116
- fix: handle null descriptions in OLS import task by @mehmetcanay in #118
Full Changelog: v0.5.6...v0.5.7
v0.5.6
v0.5.5
What's Changed
- feat: enable JSONL import generation from OHDSI without vector embeddings by @mehmetcanay in #104
- chore(deps): bump the all-dependencies group across 1 directory with 4 updates by @dependabot in #103
- refactor: align SQLite and Base repository with Weaviate by @mehmetcanay in #106
- refactor: enable OLS vectorizer support by @mehmetcanay in #108
- chore(deps): bump the all-dependencies group with 2 updates by @dependabot in #109
- fix: check if description is a list or string by @mehmetcanay in #110
- Update tests.yml by @tiadams in #112
Full Changelog: v0.5.4...v0.5.5