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Releases: StuntsPT/Structure_threader

Bells and whistles

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@StuntsPT StuntsPT released this 14 Mar 17:48

Lots of changes in this new release.

  • Implemented improved logging (with colors!)
  • The arguments are now split between run and plot
    • There were plenty of changes to the way arguments are handled, so this will break backwards compatibility.
  • Lots of plotting fixes
  • Improved sanity checks stop the user from entering input file errors
  • General bugfixes and interface polish.

This is a .0 version, so please report any bugs you find.

Silver lined suspenders

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@StuntsPT StuntsPT released this 14 Mar 11:52

Bugfix release.
Got rid of a pair of global variables that were causing issues on MS Windows.

Silver lined suspenders

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@StuntsPT StuntsPT released this 13 Mar 10:57

This release adds a couple of bugfixes related to plots on MavericK runs.

Silver lined suspenders

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@StuntsPT StuntsPT released this 11 Mar 00:13

In the 0.3 series, Structure_threader brings some news.
MavericK is now fully supported, including plotting.

Plots also have a few news - In addition the the .svg file produced with matplotlib, Structure_threader now also produces a new dynamic and interactive HTML plot, using the library plotly.
Documentation is a bit behind schedule, but will get there eventually.

Smackdown

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@StuntsPT StuntsPT released this 09 Mar 17:49

This new version implements a MavericK wrapper.
It still does not plot it's results, but that should change in v0.3.0

Smackdown

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@StuntsPT StuntsPT released this 10 Feb 23:44

In this release the --min_K option was removed and anew option -K-list was made available instead. This should allow running any arbitrary values of "K".

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@StuntsPT StuntsPT released this 07 Feb 17:40

What's new?

  • Corrected a bug where the plotter script would crash if only a single replicate was requested when wrapping STRUCTURE.

Smackdown

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@StuntsPT StuntsPT released this 02 Nov 11:08

Bugfix release.

  • Fixed a bug where non standard file extensions on the input file would cause Structure_threader to error out when wrapping fastStructure .

Smackdown

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@StuntsPT StuntsPT released this 31 Oct 23:54

Second release in the Smackdown series.
No big changes to log, this release simply prevents installation on python2 to avoid wrong pip number woes.

Smackdown

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@StuntsPT StuntsPT released this 03 Oct 16:50

Structure_threader now supports plotting from data built with the "USEPOPINFO" flag set from STRUCTURE.
This was the last feature/bugfix required to hit the 0.2 milestone, so here it is - the end of Roadkill release cycle and into Smackdown.