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2 changes: 1 addition & 1 deletion examples/pytorch/bgnn/BGNN.py
Original file line number Diff line number Diff line change
Expand Up @@ -209,7 +209,7 @@ def train_model(self, model_in, target_labels, train_mask, optimizer):
elif self.task == "classification":
loss = F.cross_entropy(pred, y.long())
else:
raise NotImplemented(
raise NotImplementedError(
"Unknown task. Supported tasks: classification, regression."
)

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2 changes: 1 addition & 1 deletion examples/pytorch/evolveGCN/train.py
Original file line number Diff line number Diff line change
Expand Up @@ -41,7 +41,7 @@ def train(args, device):
in_feats=int(g.ndata["feat"].shape[1]), num_layers=args.n_layers
)
else:
return NotImplementedError("Unsupported model {}".format(args.model))
raise NotImplementedError("Unsupported model {}".format(args.model))
model = model.to(device)
optimizer = torch.optim.Adam(model.parameters(), lr=args.lr)

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2 changes: 1 addition & 1 deletion examples/pytorch/han/utils.py
Original file line number Diff line number Diff line change
Expand Up @@ -263,7 +263,7 @@ def load_data(dataset, remove_self_loop=False):
elif dataset == "ACMRaw":
return load_acm_raw(remove_self_loop)
else:
return NotImplementedError("Unsupported dataset {}".format(dataset))
raise NotImplementedError("Unsupported dataset {}".format(dataset))


class EarlyStopping(object):
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6 changes: 5 additions & 1 deletion examples/pytorch/jtnn/jtnn/chemutils.py
Original file line number Diff line number Diff line change
Expand Up @@ -314,7 +314,11 @@ def enum_attach_nx(ctr_mol, nei_node, amap, singletons):


# Try rings first: Speed-Up
def enum_assemble_nx(node, neighbors, prev_nodes=[], prev_amap=[]):
def enum_assemble_nx(node, neighbors, prev_nodes=None, prev_amap=None):
if prev_nodes is None:
prev_nodes = []
if prev_amap is None:
prev_amap = []
all_attach_confs = []
singletons = [
nei_node["nid"]
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4 changes: 3 additions & 1 deletion examples/pytorch/jtnn/jtnn/jtnn_dec.py
Original file line number Diff line number Diff line change
Expand Up @@ -80,7 +80,9 @@ def can_assemble(mol_tree, u, v_node_dict):
return len(cands) > 0


def create_node_dict(smiles, clique=[]):
def create_node_dict(smiles, clique=None):
if clique is None:
clique = []
return dict(
smiles=smiles,
mol=get_mol(smiles),
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