Open
Conversation
|
Codecov Report❌ Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## master #56 +/- ##
==========================================
- Coverage 96.33% 96.21% -0.12%
==========================================
Files 52 52
Lines 14506 14621 +115
==========================================
+ Hits 13974 14068 +94
- Misses 532 553 +21
Flags with carried forward coverage won't be shown. Click here to find out more. ☔ View full report in Codecov by Sentry. 🚀 New features to boost your workflow:
|
eefd1c8 to
02ab85b
Compare
Makes _only_matches more flexible, adding ability to drop rows instead of columns. pytest -k Test_trim works, the rest will be broken Needs to be ported to all other methods depending on the old _only_matches
…p around trim, updated docstrings, tests Indv docstrings now use _kwargs_subs, class docstring corrected to match new parameters
…ock detection in docstring to survive dedentation (py313 failed) This was the origin of fails in the original logic between py312 and py313 https://docs.python.org/3/whatsnew/3.13.html#other-language-changes
… when pulling dosctrings from aligntop, other minor docstring
…As on the fly, inform and refuse to init, tests pending
Makes _only_matches more flexible, adding ability to drop rows instead of columns. pytest -k Test_trim works, the rest will be broken Needs to be ported to all other methods depending on the old _only_matches
… when pulling dosctrings from aligntop, other minor docstring
c5eb6d1 to
ff1ccf0
Compare
…ntil deprecation re-apply dd277b6 manually w/o lots of conflicts because the method is elsewhere in the file
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
API Break: changes the way in which the *_match methods of AlignerConsensus work: