Deduplicate @param documentation via @inheritParams#532
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billdenney merged 3 commits intomainfrom Apr 12, 2026
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Replace redundant @param definitions for conc.blq, conc.na, check, first.tmax, and clast with @inheritParams from canonical source functions. This establishes clean.conc.blq as the single canonical source for conc.blq, conc.na, and check parameters across the package. Changes across 8 files: - auc.R: inherit conc.blq/conc.na/check from clean.conc.blq - half.life.R: inherit from clean.conc.blq and pk.calc.tmax - interpolate.conc.R: inherit from clean.conc.blq - tss.R: inherit from clean.conc.blq - aucint.R: remove duplicate clast params (already inherited from pk.calc.auxc) - pk.calc.simple.R: standardize check param on tmax/tmin/tlast/clast.obs/ceoi - pk.calc.c0.R: inherit check from clean.conc.blq - pk.calc.urine.R: inherit options on pk.calc.ertmax https://claude.ai/code/session_01P98oRHijPz2ZyT8Mx3nqUC
Adds a GitHub Action that runs roxygen2::roxygenise() on pull requests and commits any man/ or NAMESPACE changes back to the PR branch. This ensures documentation stays in sync with roxygen2 comments without requiring a local R installation. https://claude.ai/code/session_01P98oRHijPz2ZyT8Mx3nqUC
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Summary
@paramdefinitions forconc.blq,conc.na,check,first.tmax, andclastwith@inheritParamsfrom canonical source functionsclean.conc.blqas the single canonical source forconc.blq,conc.na, andcheckparameters across the packageoptionsfromPKNCA.choose.optioninpk.calc.ertmax(urine)clast/clast.obs/clast.preddefinition fromaucint.R(already inherited frompk.calc.auxc)Canonical source functions
conc.blq,conc.na,checkclean.conc.blqcheck(conc-only)pk.calc.cmaxfirst.tmaxpk.calc.tmaxclast,clast.obs,clast.predpk.calc.auxcoptionsPKNCA.choose.optionFiles changed (8)
R/auc.R— inheritconc.blq/conc.na/checkfromclean.conc.blqR/half.life.R— inherit fromclean.conc.blqandpk.calc.tmaxR/interpolate.conc.R— inherit fromclean.conc.blqR/tss.R— inherit fromclean.conc.blqR/aucint.R— remove duplicateclastparams (already inherited viapk.calc.auxc)R/pk.calc.simple.R— standardizecheckontmax/tmin/tlast/clast.obs/ceoiR/pk.calc.c0.R— inheritcheckfromclean.conc.blqR/pk.calc.urine.R— inheritoptionsonpk.calc.ertmaxTest plan
devtools::document()to regenerateman/pagesman/before/after)devtools::check()— no undocumented parameter warnings?pk.calc.auxc,?pk.calc.half.life,?interp.extrap.conchttps://claude.ai/code/session_01P98oRHijPz2ZyT8Mx3nqUC