All

26 repositories

multi-package-containers
Public
Testing building mulled containers for multi-requirement tools.
docker containers
docker containers
236•84•3•121•Updated Apr 3, 2026Apr 3, 2026
containers
Public
Bioinformatics containers
dockerfiles bioinformatics docker-image
dockerfiles bioinformatics docker-image rkt bioinformatics-containers biocontainers-architecture bioinformatics-analysis
Dockerfile
•
Apache License 2.0
•266•780•41•11•Updated Mar 30, 2026Mar 30, 2026
registry
Public
Docker for Bioinformatics
vuejs vue biodocker
vuejs vue biodocker biocontainers-web
Vue
•
Apache License 2.0
•15•20•14•18•Updated Mar 27, 2026Mar 27, 2026
singularity-build-bot
Public
Nightly build of Singularity containers
Python
•3•8•1•0•Updated Mar 15, 2026Mar 15, 2026
ci
Public
Continuous integrations scripts for biocontainers
Python
•1•0•5•4•Updated Nov 10, 2025Nov 10, 2025
bioconda2biocontainer
Public
BioContainers API client
Python
•
Other
•0•3•1•0•Updated Sep 25, 2025Sep 25, 2025
edu
Public
BioContainers Documentation.
documentation containers travis
documentation containers travis readthedocs bioconda biocontainers documentation-code
JavaScript
•23•7•2•2•Updated Jul 25, 2024Jul 25, 2024
biocontainers-backend
Public
Python backend for Biocontainers (Flask + MongoDB)
rest-api restful-api ga4gh
rest-api restful-api ga4gh ga4gh-server biocontainers
Python
•
Apache License 2.0
•1•5•7•2•Updated Apr 8, 2024Apr 8, 2024
mulled
Public
Mulled - Automatized Containerized Software Repository
docker bioinformatics rkt
docker bioinformatics rkt mulled involucro
38•67•3•14•Updated Mar 18, 2024Mar 18, 2024
specs
Public
BioContainers specifications
docker bioinformatics specifications
docker bioinformatics specifications rkt biocontainers-specification biocontainers bioinformatics-containers biocontainers-architecture bioinformatics-analysis
Apache License 2.0
•11•52•3•0•Updated Mar 1, 2023Mar 1, 2023
tools-metadata
Public
Repository to storage clean metadata of the containers in biocontainers registry
Python
•
Apache License 2.0
•5•4•5•0•Updated Jan 19, 2021Jan 19, 2021
backup-scripts
Public
scritps for different backups in biocontainers
Python
•
Apache License 2.0
•0•0•1•0•Updated Jun 2, 2020Jun 2, 2020
bioconda-recipes
Public
Conda recipes for the bioconda channel.
Shell
•3.8k•0•0•0•Updated Apr 21, 2020Apr 21, 2020
workflows
Public
Bioinformatics curated workflows that use Biocontainers tools
bioinformatics bioinformatics-pipeline workflows
bioinformatics bioinformatics-pipeline workflows
Apache License 2.0
•4•19•0•0•Updated Jun 11, 2019Jun 11, 2019
registry-web-dev
Public archive
BioContainers Registry UI, hosted in http://biocontainers.pro
Vue
•
Apache License 2.0
•1•0•0•0•Updated Mar 6, 2019Mar 6, 2019
tool-registry-service-schemas
Public
APIs for discovering genomics tools, their metadata and their containers
Shell
•
Apache License 2.0
•19•0•0•0•Updated Nov 26, 2018Nov 26, 2018
registry-backend-deprecated
Public archive
Java
•
Apache License 2.0
•1•0•6•0•Updated Oct 9, 2018Oct 9, 2018
service-containers
Public
Repository containing Services that can be deploy using Containers technologies (Docker Compose, Heml)
0•1•1•0•Updated Sep 20, 2018Sep 20, 2018
biotools-bioconda-ids
Public
Mapping scripts between bioconda and biotools IDs
Jupyter Notebook
•4•1•0•1•Updated Mar 23, 2018Mar 23, 2018
containers-ci-system
Public
Shell
•0•0•0•0•Updated Feb 2, 2018Feb 2, 2018
kubernetes-init
Public
Shell
•0•1•0•0•Updated Nov 10, 2017Nov 10, 2017
workshops
Public
Repository for BioContainers Hackthons and Workshops
bioinformatics workshop materials
bioinformatics workshop materials containers hackthon
JavaScript
•
Apache License 2.0
•3•2•0•1•Updated Oct 10, 2017Oct 10, 2017
auto-mulled
Public
Generating Docker containers from bioconda on the fly with Travis cron-job feature.
MIT License
•3•5•3•0•Updated Jun 23, 2017Jun 23, 2017
software-archive
Public
Binary and source code archive
internal bioinformatics binaries
internal bioinformatics binaries binary-data
0•0•1•0•Updated Feb 7, 2017Feb 7, 2017
local-containers
Public
This repository contains all the containers that can't be deploy in public registries or need customs settings
docker-image biocontainers private-cotainers
docker-image biocontainers private-cotainers
Shell
•1•1•0•0•Updated Oct 13, 2016Oct 13, 2016
tools
Public
Tools used for the management of the repositories
Shell
•
Apache License 2.0
•0•0•0•0•Updated Oct 4, 2015Oct 4, 2015

ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

BioContainers

All

All

26 repositories

multi-package-containers

containers

registry

singularity-build-bot

ci

bioconda2biocontainer

edu

biocontainers-backend

mulled

specs

tools-metadata

backup-scripts

bioconda-recipes

workflows

registry-web-dev

tool-registry-service-schemas

registry-backend-deprecated

service-containers

biotools-bioconda-ids

containers-ci-system

kubernetes-init

workshops

auto-mulled

software-archive

local-containers

tools

All

All

Repositories list

26 repositories