Repositories list

• analysis-wdls

  Public
  Scalable genomic analysis pipelines, written in WDL

  WDL

  •

  MIT License

  •1717 forks•1212 stars•4444 issues•99 pull requests•Updated Sep 16, 2026Sep 16, 2026

• cloud-workflows

  Public
  Infrastructure and tooling required to get genomic workflows running in the cloud

  Python

  •88 forks•11 star•99 issues•55 pull requests•Updated Sep 11, 2026Sep 11, 2026

• immuno_gcp_wdl_compute1

  Public
  Tutorial for running immuno.wdl on Google Cloud starting from local data

  MIT License

  •66 forks•00 stars•00 issues•00 pull requests•Updated Sep 10, 2026Sep 10, 2026

• immuno_lsf_wdl_compute1

  Public
  Tutorial for running immuno.wdl using LSF on WASHU compute1

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Dec 18, 2025Dec 18, 2025

• metadata-management

  Public
  Web interface and APIs for managing genomic metadata.

  Ruby

  •00 forks•11 star•00 issues•00 pull requests•Updated Dec 3, 2025Dec 3, 2025

• .github

  Public
  Main profile page

  00 forks•00 stars•00 issues•00 pull requests•Updated Jul 3, 2025Jul 3, 2025

• immuno_slurm_wdl_discovery

  Public
  Tutorial for running immuno.wdl on JHU Discovery using slurm scheduler

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 13, 2025May 13, 2025

• immuno_gcp_wdl_local

  Public
  Tutorial for running immuno.wdl on Google Cloud

  MIT License

  •22 forks•22 stars•00 issues•00 pull requests•Updated Jun 16, 2022Jun 16, 2022