ami _documentation

Documentation template for ami

(Examples taken from ami pixel)

AMIPixelTool

picocli help:

ami pixel --help
Usage: ami pixel [OPTIONS]
Description
===========
Analyzes bitmaps - generally binary, but may be oligochrome.
Creates pixelIslands.

filestore/ctree

The output of pixel can be complex since we may divide in several ways under pdfimages:

• colour channels
• pixel islands
• image processing

This image is:

https://github.com/petermr/ami3/blob/master/src/test/resources/org/contentmine/ami/ \
    battery10/ \
       PMC3463005/ \
         pdfimages/ \
            image.6.2.86_509.389_714/ \
                octree/ \
                    channel.1d1ce2.png

picocli options

Options
=======
      --filename=<basename>
                          name for transformed Imagefile
                            Default: default
  -h, --help              Show this help message and exit.
      --islands=<maxIslandCount>
                          create pixelIslands and tabulate properties of first $maxIslandCount islands sorted by size.0
                            means no anaysis.
                            Default: 10