Model fitting and inference for infectious disease dynamics

This repository contains the material to create the mfiidd course page.

All the raw material is in the folder Rmd/ and is written in Rmarkdown. Any changes to the Rmarkdown files are automatically updated on the web site once committed to the main branch.

Local testing

The html pages can be generated locally using the function

rmarkdown::render_site("Rmd/")

This creates the html pages in the Rmd/_site directory.