cancer-bioinformatics

Here are 3 public repositories matching this topic...

rithikostwal-cell / Melanoma-TME-AI-Pipeline

End-to-end scRNA-seq + AI pipeline for melanoma TME biomarker discovery. CD79A validated in TCGA-SKCM (n=314, Log-Rank p=0.0044, +18.1 months OS).

python tcga xgboost scrna-seq biomarker-discovery melanoma shap tumor-microenvironment scanpy cancer-bioinformatics

Updated Jun 3, 2026
Python

Marta-Barea / tcga-kirc-bioinformatics

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Implementation of a Bioinformatics Strategy Applied to Clear Cell Renal Cell Carcinoma (ccRCC)

bioinformatics r statistics r-markdown shiny-apps tcga-data cancer-research r-studio oncology-data r-programming-language cancer-bioinformatics tcga-kirc

Updated Jun 14, 2026
R

Mohamed-H-Hussein / Research-Trainings-2025

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Comprehensive notes, workflows, and projects from 2025 research trainings on 16S rRNA, scRNA-seq, Nextflow, Galaxy, plant & marine genomics, and cancer bioinformatics, including hands-on Galaxy and reproducible pipeline .

bash bioinformatics genomics reproducible-research scrna-seq galaxy quarto 16s-rrna nextflow-workflow plant-genomics marine-genomics training-notes cancer-bioinformatics

Updated Mar 16, 2026
Nextflow

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