Detection of remote homology by comparison of protein language model representations
-
Updated
Dec 16, 2024 - Python
#
computional-biology
Here are 8 public repositories matching this topic...
A flexible and sensitive method for capturing and integrating multimodal epigenetic information from cell-free DNA (cfDNA) using a single experimental assay.
python machine-learning bioinformatics pypi sequencing dna methylation epigenetics ensemble-learning wgbs cfdna fragmentation multimodal nucleosome em-seq stacking-ensemble computional-biology
-
Updated
Mar 11, 2026 - Jupyter Notebook
Splitpea Python package for building rewired protein-protein interaction networks from alternative splicing events
-
Updated
Apr 10, 2026 - Jupyter Notebook
AI-Powered miRNA Analysis & Experiment Design Tool 2026 🧬🔍
bioinformatics genomics sequencing flask-application enrichment-analysis rag generative-ai computional-biology llm-inference
-
Updated
Apr 23, 2026
This repository contains a Google Colab notebook designed for running high-performance Molecular Dynamics (MD) simulations using NAMD 3 with CUDA acceleration.
bioinformatics molecular-dynamics molecular-dynamics-simulation drug-discovery drug-design namd computional-biology namd3
-
Updated
Nov 24, 2025 - Jupyter Notebook
clique finder Combinatorial Algorithms in Bioinformatics classes (PUT)
-
Updated
Mar 21, 2023 - C++
Fine-tuning OLMo-7B with QLoRA & DeepChem for Molecular Toxicity Prediction on the Tox21 dataset.
-
Updated
Feb 8, 2026 - Python
An AI-powered platform for interpreting enrichment analysis, prioritizing causal biology vs confounders, and generating experiment-ready follow-up plans with literature-aware reasoning.
bioinformatics genomics sequencing flask-application enrichment-analysis rag generative-ai computional-biology llm-inference
-
Updated
Apr 22, 2026 - Python
Improve this page
Add a description, image, and links to the computional-biology topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the computional-biology topic, visit your repo's landing page and select "manage topics."