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de-novo

Here are 9 public repositories matching this topic...

chanzuckerberg / shasta

[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads

nanopore assembly sequencing dna long-read pacbio de-novo

Updated Oct 13, 2022
C++

sequana / sequana

Sequana: a set of Snakemake NGS pipelines

coverage rna-seq snakemake taxonomy ngs pacbio variant-calling de-novo sequanix

Updated Sep 1, 2026
Python

MSDLLCpapers / ovo

OVO, an open-source ecosystem for de novo protein design

nextflow protein-design de-novo bindcraft rfdiffusion

Updated Sep 3, 2026
Python

novak-jiri / cyclobranch

A tool for mass spectrometry data analysis.

bioinformatics metabolomics mass-spectrometry lc-ms ms-data imaging peptide-identification peptides mzml image-fusion desi-msi imzml de-novo dereplication mass-spectrometry-imaging bioinformatics-tool maldi-msi

Updated Aug 21, 2023
C++

stajichlab / REPET-slurm

SLURM-ready bash scripts to run the complete REPET pipeline

bioinformatics repeats slurm genome-annotation transposons repet transposable-elements de-novo

Updated Jun 14, 2019
Shell

QureGenAI-Biotech / quantum-aidd-api-mcp-server

a quantum AI drug design platform providing API and MCP server, powered QureGenAI

hts de-novo aidd ai-drug-design

Updated Jul 28, 2025

davidmeijer / CLM-Harvest-depr

De novo generation of specialized metabolites for biosynthetic gene clusters.

generation de-novo chemical-language-model biosynthetic-gene-cluster natural-product specialized-metabolite

Updated Apr 3, 2026
Python

mizcausevic-dev / fda-samd-classification-board

Hash-chained, append-only record schema + reference verifier for an AI/ML medical device's FDA SaMD classification lifecycle, pre-submission through 510(k)/De Novo/PMA, PCCP per FDA Dec 2024 final, post-market modifications, 21 CFR §820 QMS evidence refs. Healthcare-readiness scaffolding, not certification.

fda samd ai-safety de-novo healthtech pccp ai-governance 510k 21-cfr-820 kinetic-gain-protocol-suite predetermined-change-control-plan

Updated Aug 10, 2026
JavaScript

Synovial-tenure940 / Shasta

Play and preview Core Animation archives (.caar) and bundles (.ca) with support for vector animations and QuickLook integration.

macos kubernetes middleware nanopore assembly smart-contracts tron long-read trx object-tracking hacktoberfest solidity-dapps hewlett-packard-enterprise de-novo lidar-object-tracking ibnzuk caar

Updated Sep 3, 2026
Swift

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