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metataxonomics

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Qasim-Hussain-Code / mucosal-pan-omics

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A computational metataxonomics pipeline for 16S rRNA-seq, quantifying mucosal dysbiosis, differential microbial abundance, and co-occurrence network topologies to identify keystone taxa in Crohn's Disease.

network-topology systems-biology ibd crohns-disease microbiome microbiota microbial-ecology amplicon-sequencing 16s-rrna differential-abundance dysbiosis metataxonomics mucosal-immunity pan-omics co-occurrence-networks
  • Updated May 9, 2026
  • R

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