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Pull requests: Clinical-Genomics/cg

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Pull requests list

Add input amount to all orders sample metadata for delivery report
#5011 opened Apr 8, 2026 by diitaz93 Contributor • Draft
1 of 15 tasks
1
16
Changes for running NIPT on NovaSeqX
#5009 opened Apr 8, 2026 by islean Member • Draft
15 tasks
Increase the fallback for microSALT version command
#4974 opened Mar 24, 2026 by RasmusBurge-CG Contributor Loading…
15 tasks
5
Send seq technique to Scout
#4968 opened Mar 20, 2026 by RasmusBurge-CG Contributor Loading…
15 tasks
1
Upload raw data in main upload command
#4965 opened Mar 19, 2026 by mogmi Contributor • Draft
16 tasks
1
2
Update Nallo to 0.11.0
#4948 opened Mar 11, 2026 by fellen31 Contributor • Draft
1 of 15 tasks
1
DEV - Switch reference genome to hg38 for raredisease
#4871 opened Feb 4, 2026 by diitaz93 Contributor • Draft
15 tasks
22
Patch post processing error raising
#4849 opened Jan 22, 2026 by islean Member Loading…
15 tasks
4
Add hasta2 login deploy workflow
#4825 opened Jan 14, 2026 by ahdamin Contributor Loading…
@ahdamin
2
Switch from abstract classes to protocols with generic types
#4797 opened Dec 22, 2025 by mogmi Contributor • Draft
15 tasks
2
Create analysis in Trailblazer first for raw-data
#4793 opened Dec 19, 2025 by mogmi Contributor • Draft
15 tasks
1
remove workflow_bin_path for taxprofiler
#4787 opened Dec 17, 2025 by RasmusBurge-CG Contributor Loading…
1 of 15 tasks
1
Remove workflow_bin_path
#4786 opened Dec 16, 2025 by RasmusBurge-CG Contributor Loading…
15 tasks
3
update variant catalog path in raredisease bundle
#4781 opened Dec 16, 2025 by ramprasadn Contributor Loading…
15 tasks
1
Add parent model for nextflow configs
#4773 opened Dec 12, 2025 by kedhammar Contributor • Draft
15 tasks
@diitaz93 @kedhammar
2
Test call to config case fails
#4710 opened Nov 13, 2025 by mogmi Contributor Loading…
15 tasks
1
Add analysis cascading
#4680 opened Oct 30, 2025 by islean Member • Draft
15 tasks
4
Fix the tests and coverage badge
#4646 opened Oct 7, 2025 by dnil Member Loading…
5 of 9 tasks
1
Make RNAFUSION samples be always tumour
#4537 opened Aug 1, 2025 by diitaz93 Contributor • Draft
2 of 12 tasks
2
23
Filter cancelled Samples for Tomte dna upload
#4498 opened Jul 8, 2025 by ahdamin Contributor Loading…
15 tasks
1
chore: create LICENSE file
#4472 opened Jun 26, 2025 by pbiology Contributor Loading…
1 of 3 tasks
1
Rnafusion 4: merge only on release
#4385 opened May 7, 2025 by rannick Contributor • Draft
15 tasks
3
work in progress: FreshDesk CLI
#4290 opened Mar 14, 2025 by RasmusBurge-CG Contributor • Draft
15 tasks
1
feat(keycloak authentication)
#4162 opened Jan 28, 2025 by ChrOertlin Contributor Loading…
15 tasks
1
22
Enable hidden analysis in TB to be uploaded
#4003 opened Dec 6, 2024 by eliottBo Contributor Loading…
1 of 15 tasks
1
@eliottBo
4
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